Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a2Q9JLR1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a2Q9JLR1 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Rprl2-201ENSMUST00000157150 290 ntBASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Gm18889-201ENSMUST00000174284 929 ntBASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a2Q9JLR1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Gm37230-201ENSMUST00000194491 818 ntBASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.75□□□□□ -0.37
Sec61a2Q9JLR1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Mir6990-201ENSMUST00000183724 91 ntBASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Gm18057-201ENSMUST00000208220 503 ntBASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a2Q9JLR1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms