Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lima1Q9ERG0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Gm16198-201ENSMUST00000118766 670 ntBASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Gm9727-201ENSMUST00000161387 555 ntBASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Gm8584-201ENSMUST00000171982 758 ntBASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lima1Q9ERG0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.96□□□□□ -0.17
Lima1Q9ERG0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Thap2-203ENSMUST00000218989 527 ntBASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lima1Q9ERG0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lima1Q9ERG0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Lima1Q9ERG0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lima1Q9ERG0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lima1Q9ERG0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Gm17968-201ENSMUST00000194902 784 ntBASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lima1Q9ERG0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lima1Q9ERG0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms