Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Gm6152-201ENSMUST00000151704 340 ntBASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Gm38341-201ENSMUST00000195357 515 ntBASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Gm42627-201ENSMUST00000197347 224 ntBASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Cts7-204ENSMUST00000225321 1257 ntBASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-4Q9EQM3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Gm12203-201ENSMUST00000118235 598 ntBASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Gm12209-201ENSMUST00000120089 596 ntBASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Gm27682-201ENSMUST00000183930 110 ntBASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Gm6334-201ENSMUST00000207083 228 ntBASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Gm18935-201ENSMUST00000212692 664 ntBASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.4□□□□□ -0.1
Nkx2-4Q9EQM3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Gm9368-201ENSMUST00000219348 831 ntBASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-4Q9EQM3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms