Protein–RNA interactions for Protein: Q9DBU0

Tm9sf1, Transmembrane 9 superfamily member 1, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm9sf1Q9DBU0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tm9sf1Q9DBU0 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.12□□□□□ -0.15
Tm9sf1Q9DBU0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tm9sf1Q9DBU0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tm9sf1Q9DBU0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Tm9sf1Q9DBU0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tm9sf1Q9DBU0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tm9sf1Q9DBU0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tm9sf1Q9DBU0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Gm13036-201ENSMUST00000117799 748 ntBASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Gm7862-201ENSMUST00000121461 292 ntBASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tm9sf1Q9DBU0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Gm28033-201ENSMUST00000184224 96 ntBASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tm9sf1Q9DBU0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms