Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Gm43703-201ENSMUST00000200523 763 ntBASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.22□□□□□ -0.45
Ssmem1Q9D9Y8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssmem1Q9D9Y8 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.21□□□□□ -0.46
Ssmem1Q9D9Y8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssmem1Q9D9Y8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssmem1Q9D9Y8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssmem1Q9D9Y8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssmem1Q9D9Y8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssmem1Q9D9Y8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssmem1Q9D9Y8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssmem1Q9D9Y8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssmem1Q9D9Y8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ssmem1Q9D9Y8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssmem1Q9D9Y8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Gm27838-201ENSMUST00000184829 128 ntBASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.2□□□□□ -0.46
Ssmem1Q9D9Y8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms