Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
U2af1Q9D883 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC18.57■□□□□ 0.56
U2af1Q9D883 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
U2af1Q9D883 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
U2af1Q9D883 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
U2af1Q9D883 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
U2af1Q9D883 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC18.56■□□□□ 0.56
U2af1Q9D883 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
U2af1Q9D883 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
U2af1Q9D883 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.56■□□□□ 0.56
U2af1Q9D883 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
U2af1Q9D883 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC18.56■□□□□ 0.56
U2af1Q9D883 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
U2af1Q9D883 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
U2af1Q9D883 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
U2af1Q9D883 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.56■□□□□ 0.56
U2af1Q9D883 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.56■□□□□ 0.56
U2af1Q9D883 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
U2af1Q9D883 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
U2af1Q9D883 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
U2af1Q9D883 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
U2af1Q9D883 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
U2af1Q9D883 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
U2af1Q9D883 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
U2af1Q9D883 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
U2af1Q9D883 Gm7488-201ENSMUST00000117148 684 ntBASIC18.55■□□□□ 0.56
U2af1Q9D883 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.55■□□□□ 0.56
U2af1Q9D883 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.55■□□□□ 0.56
U2af1Q9D883 Gm21854-201ENSMUST00000179901 471 ntBASIC18.55■□□□□ 0.56
U2af1Q9D883 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.55■□□□□ 0.56
U2af1Q9D883 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.55■□□□□ 0.56
U2af1Q9D883 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
U2af1Q9D883 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
U2af1Q9D883 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
U2af1Q9D883 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Gm22189-201ENSMUST00000103822 86 ntBASIC18.54■□□□□ 0.56
U2af1Q9D883 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
U2af1Q9D883 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.54■□□□□ 0.56
U2af1Q9D883 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.54■□□□□ 0.56
U2af1Q9D883 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
U2af1Q9D883 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.54■□□□□ 0.56
U2af1Q9D883 Gm10766-202ENSMUST00000194123 606 ntBASIC18.54■□□□□ 0.56
U2af1Q9D883 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
U2af1Q9D883 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
U2af1Q9D883 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
U2af1Q9D883 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
U2af1Q9D883 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
U2af1Q9D883 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
U2af1Q9D883 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.53■□□□□ 0.56
U2af1Q9D883 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Gm38102-201ENSMUST00000192791 1935 ntBASIC18.53■□□□□ 0.56
U2af1Q9D883 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
U2af1Q9D883 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms