Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Chmp5Q9D7S9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Gm7461-201ENSMUST00000058918 827 ntBASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp5Q9D7S9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp5Q9D7S9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Gm17968-201ENSMUST00000194902 784 ntBASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC17.65■□□□□ 0.42
Chmp5Q9D7S9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Chmp5Q9D7S9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp5Q9D7S9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp5Q9D7S9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp5Q9D7S9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms