Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Mir6982-201ENSMUST00000184354 68 ntBASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Gm27742-201ENSMUST00000184667 60 ntBASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.3□□□□□ -0.12
Sf3a3Q9D554 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3a3Q9D554 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3a3Q9D554 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms