Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim42Q9D2H5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Olfr286-202ENSMUST00000205305 969 ntBASIC14.15□□□□□ -0.14
Trim42Q9D2H5 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim42Q9D2H5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Gm8584-201ENSMUST00000171982 758 ntBASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Gm9182-201ENSMUST00000217829 639 ntBASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim42Q9D2H5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms