Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Mrpl55Q9CZ83 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Mrpl55Q9CZ83 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Mrpl55Q9CZ83 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Mrpl55Q9CZ83 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC9.4□□□□□ -0.91
Mrpl55Q9CZ83 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Mrpl55Q9CZ83 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Mrpl55Q9CZ83 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Mrpl55Q9CZ83 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Mir7036b-201ENSMUST00000184791 63 ntBASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gm9682-201ENSMUST00000197505 556 ntBASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 AC122024.2-201ENSMUST00000220086 871 ntBASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Ndufaf2-202ENSMUST00000223734 556 ntBASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 AC225888.1-201ENSMUST00000227184 728 ntBASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Rbfox2-206ENSMUST00000227314 1810 ntBASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC9.39□□□□□ -0.91
Mrpl55Q9CZ83 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 AC158538.2-201ENSMUST00000225455 906 ntBASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Mrpl55Q9CZ83 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms