Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldnd1Q9CQX5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Gm6152-201ENSMUST00000151704 340 ntBASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Gm16570-201ENSMUST00000161951 436 ntBASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Gm37466-201ENSMUST00000195692 652 ntBASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Gm44364-201ENSMUST00000198368 141 ntBASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Gm42550-201ENSMUST00000201553 960 ntBASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldnd1Q9CQX5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Gm1335-201ENSMUST00000121653 386 ntBASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Proscos-202ENSMUST00000178990 666 ntBASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Gm37008-201ENSMUST00000195712 319 ntBASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldnd1Q9CQX5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.35□□□□□ -0.11
Cldnd1Q9CQX5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms