Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm9727-201ENSMUST00000161387 555 ntBASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nipsnap3bQ9CQE1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm12260-201ENSMUST00000122447 411 ntBASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nipsnap3bQ9CQE1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm6973-201ENSMUST00000117080 721 ntBASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm15427-201ENSMUST00000117288 531 ntBASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm10275-202ENSMUST00000168697 495 ntBASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm27741-201ENSMUST00000185060 237 ntBASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm10275-201ENSMUST00000092620 635 ntBASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nipsnap3bQ9CQE1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 403.6 ms