Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Gm15483-201ENSMUST00000120338 456 ntBASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Gm5177-201ENSMUST00000183092 997 ntBASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Gm2272-201ENSMUST00000194903 582 ntBASIC13.86□□□□□ -0.19
Trim8Q99PJ2 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.86□□□□□ -0.19
Trim8Q99PJ2 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim8Q99PJ2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Gm5364-201ENSMUST00000216789 889 ntBASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim8Q99PJ2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Gm27301-201ENSMUST00000184012 127 ntBASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Gm17968-201ENSMUST00000194902 784 ntBASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Gm45098-201ENSMUST00000207179 657 ntBASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Thap2-203ENSMUST00000218989 527 ntBASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim8Q99PJ2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms