Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Gm7857-201ENSMUST00000117957 358 ntBASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Gm37922-201ENSMUST00000195596 455 ntBASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdh23Q99PF4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdh23Q99PF4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Gm24830-201ENSMUST00000102024 166 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Gm25890-201ENSMUST00000177643 165 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Gm22614-201ENSMUST00000178300 165 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Gm7467-201ENSMUST00000185173 652 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Gm22042-201ENSMUST00000082989 165 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Gm26232-201ENSMUST00000083360 166 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Gm24136-201ENSMUST00000083374 165 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Gm26110-201ENSMUST00000083971 165 ntBASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdh23Q99PF4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh23Q99PF4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Gm25668-201ENSMUST00000157700 129 ntBASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Gm10268-201ENSMUST00000085340 555 ntBASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Gm18584-201ENSMUST00000203098 964 ntBASIC14.07□□□□□ -0.16
Cdh23Q99PF4 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Morn2-202ENSMUST00000227729 656 ntBASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh23Q99PF4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms