Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Gm40466-201ENSMUST00000212174 422 ntBASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx6-1Q99MA9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Gm5370-201ENSMUST00000187187 574 ntBASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Gm19078-201ENSMUST00000206311 727 ntBASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx6-1Q99MA9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx6-1Q99MA9 Sybu-209ENSMUST00000228639 4113 ntBASIC13.21□□□□□ -0.3
Nkx6-1Q99MA9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx6-1Q99MA9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx6-1Q99MA9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx6-1Q99MA9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx6-1Q99MA9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx6-1Q99MA9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Nkx6-1Q99MA9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Gm11524-201ENSMUST00000119349 807 ntBASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx6-1Q99MA9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.19□□□□□ -0.3
Nkx6-1Q99MA9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms