Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Gm13226-201ENSMUST00000117838 404 ntBASIC16.23■□□□□ 0.19
Rfc4Q99J62 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Gm2495-201ENSMUST00000191160 466 ntBASIC16.23■□□□□ 0.19
Rfc4Q99J62 Gm37714-201ENSMUST00000194742 342 ntBASIC16.23■□□□□ 0.19
Rfc4Q99J62 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.23■□□□□ 0.19
Rfc4Q99J62 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rfc4Q99J62 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Gm15429-201ENSMUST00000151268 798 ntBASIC16.22■□□□□ 0.19
Rfc4Q99J62 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Gm44608-201ENSMUST00000206827 855 ntBASIC16.22■□□□□ 0.19
Rfc4Q99J62 Gm45331-201ENSMUST00000209868 554 ntBASIC16.22■□□□□ 0.19
Rfc4Q99J62 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfc4Q99J62 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Gm11814-201ENSMUST00000119515 929 ntBASIC16.21■□□□□ 0.19
Rfc4Q99J62 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Gm45784-201ENSMUST00000188360 142 ntBASIC16.21■□□□□ 0.19
Rfc4Q99J62 Gm43094-201ENSMUST00000196549 921 ntBASIC16.21■□□□□ 0.19
Rfc4Q99J62 Gm8463-201ENSMUST00000208573 613 ntBASIC16.21■□□□□ 0.19
Rfc4Q99J62 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.21■□□□□ 0.19
Rfc4Q99J62 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfc4Q99J62 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.21■□□□□ 0.18
Rfc4Q99J62 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.18
Rfc4Q99J62 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rfc4Q99J62 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rfc4Q99J62 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Rfc4Q99J62 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.2■□□□□ 0.18
Rfc4Q99J62 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfc4Q99J62 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms