Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm10576-201ENSMUST00000191927 825 ntBASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdha3Q91Y16 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Gm25925-201ENSMUST00000158314 306 ntBASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdha3Q91Y16 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Pcdha3Q91Y16 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdha3Q91Y16 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdha3Q91Y16 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms