Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Gm23935-201ENSMUST00000102303 57 ntBASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Gm24270-201ENSMUST00000102326 57 ntBASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Gm15693-201ENSMUST00000120470 637 ntBASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Gm24245-201ENSMUST00000157318 57 ntBASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb1Q91Y08 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Gm26308-201ENSMUST00000157768 69 ntBASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Dupd1-202ENSMUST00000224735 548 ntBASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.69□□□□□ -0.06
Pcdhb1Q91Y08 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Gm6415-201ENSMUST00000118488 348 ntBASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Gm16476-201ENSMUST00000221544 139 ntBASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb1Q91Y08 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb1Q91Y08 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms