Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb18Q91Y02 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb18Q91Y02 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Gm25857-201ENSMUST00000082788 129 ntBASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb18Q91Y02 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb18Q91Y02 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb18Q91Y02 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhb18Q91Y02 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb18Q91Y02 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb18Q91Y02 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb18Q91Y02 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb18Q91Y02 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb18Q91Y02 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb18Q91Y02 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.77□□□□□ -0.04
Pcdhb18Q91Y02 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb18Q91Y02 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb18Q91Y02 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb18Q91Y02 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms