Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb3Q91XZ7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Gm11594-201ENSMUST00000122313 162 ntBASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Gm18489-201ENSMUST00000172565 551 ntBASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Gm5682-201ENSMUST00000173402 505 ntBASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Gm45696-201ENSMUST00000212088 985 ntBASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb3Q91XZ7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb3Q91XZ7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms