Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhgc5Q91XW9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Gm18624-201ENSMUST00000220966 658 ntBASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Gm9797-201ENSMUST00000052902 613 ntBASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhgc5Q91XW9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Gm28760-201ENSMUST00000185995 736 ntBASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Gm6266-201ENSMUST00000203844 806 ntBASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Gm45098-201ENSMUST00000207179 657 ntBASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgc5Q91XW9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Gm11918-201ENSMUST00000121660 179 ntBASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Gm21854-201ENSMUST00000179901 471 ntBASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgc5Q91XW9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms