Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Gm2451-201ENSMUST00000199447 999 ntBASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Gm10290-201ENSMUST00000200451 999 ntBASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps4aQ8VEJ9 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Gm27437-201ENSMUST00000183429 107 ntBASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vps4aQ8VEJ9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Gm13823-201ENSMUST00000119930 345 ntBASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Gm14042-201ENSMUST00000120139 833 ntBASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Olfr286-202ENSMUST00000205305 969 ntBASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Gm10154-201ENSMUST00000084445 354 ntBASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.74□□□□□ -0.21
Vps4aQ8VEJ9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms