Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rpap2Q8VC34 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Gm13453-201ENSMUST00000118708 357 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Gm14767-201ENSMUST00000121559 586 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Gm27680-201ENSMUST00000184192 160 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Gm17837-201ENSMUST00000186435 985 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Gm33320-201ENSMUST00000192232 530 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Gm44344-201ENSMUST00000200287 129 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Gm46209-201ENSMUST00000217912 553 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Gm18027-201ENSMUST00000218947 619 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Gm9229-201ENSMUST00000222777 126 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.5■□□□□ 0.07
Rpap2Q8VC34 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Gm13223-201ENSMUST00000118609 747 ntBASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Mir6956-201ENSMUST00000183598 62 ntBASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Gm27321-201ENSMUST00000185021 205 ntBASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpap2Q8VC34 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms