Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdt1Q8R4E9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdt1Q8R4E9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Gm14928-201ENSMUST00000120198 477 ntBASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Gm27838-201ENSMUST00000184829 128 ntBASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdt1Q8R4E9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdt1Q8R4E9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdt1Q8R4E9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.7□□□□□ -0.22
Cdt1Q8R4E9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdt1Q8R4E9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdt1Q8R4E9 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.7□□□□□ -0.22
Cdt1Q8R4E9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdt1Q8R4E9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms