Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.14□□□□□ -0.31
H2afjQ8R1M2 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afjQ8R1M2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Gm2451-201ENSMUST00000199447 999 ntBASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Gm10290-201ENSMUST00000200451 999 ntBASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Gm5364-201ENSMUST00000216789 889 ntBASIC13.13□□□□□ -0.31
H2afjQ8R1M2 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.13□□□□□ -0.31
H2afjQ8R1M2 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afjQ8R1M2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Gm14042-201ENSMUST00000120139 833 ntBASIC13.12□□□□□ -0.31
H2afjQ8R1M2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Olfr286-202ENSMUST00000205305 969 ntBASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afjQ8R1M2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afjQ8R1M2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms