Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Gm5866-201ENSMUST00000177881 973 ntBASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Gm21854-201ENSMUST00000179901 471 ntBASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Gm10766-202ENSMUST00000194123 606 ntBASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Syt7-205ENSMUST00000224135 1557 ntBASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Gm22189-201ENSMUST00000103822 86 ntBASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Gm6218-201ENSMUST00000219812 628 ntBASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp40Q8R1F9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp40Q8R1F9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms