Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Gm6415-201ENSMUST00000118488 348 ntBASIC13.36□□□□□ -0.27
Clrn1Q8K445 Gm12882-201ENSMUST00000121696 517 ntBASIC13.36□□□□□ -0.27
Clrn1Q8K445 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Gm9719-201ENSMUST00000162765 543 ntBASIC13.36□□□□□ -0.27
Clrn1Q8K445 Gm25948-201ENSMUST00000175334 112 ntBASIC13.36□□□□□ -0.27
Clrn1Q8K445 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.36□□□□□ -0.27
Clrn1Q8K445 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Clrn1Q8K445 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.35□□□□□ -0.27
Clrn1Q8K445 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Gm27631-201ENSMUST00000184163 466 ntBASIC13.35□□□□□ -0.27
Clrn1Q8K445 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.35□□□□□ -0.27
Clrn1Q8K445 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clrn1Q8K445 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clrn1Q8K445 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clrn1Q8K445 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms