Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CopaQ8CIE6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.46□□□□□ -0.09
CopaQ8CIE6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.46□□□□□ -0.09
CopaQ8CIE6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Gm12151-201ENSMUST00000121374 290 ntBASIC14.46□□□□□ -0.09
CopaQ8CIE6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Gm17837-201ENSMUST00000186435 985 ntBASIC14.46□□□□□ -0.09
CopaQ8CIE6 Gm28630-201ENSMUST00000187806 498 ntBASIC14.46□□□□□ -0.09
CopaQ8CIE6 Gm18766-201ENSMUST00000189811 808 ntBASIC14.46□□□□□ -0.09
CopaQ8CIE6 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.46□□□□□ -0.09
CopaQ8CIE6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.46□□□□□ -0.09
CopaQ8CIE6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CopaQ8CIE6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CopaQ8CIE6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CopaQ8CIE6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CopaQ8CIE6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CopaQ8CIE6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.46□□□□□ -0.1
CopaQ8CIE6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CopaQ8CIE6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CopaQ8CIE6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CopaQ8CIE6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CopaQ8CIE6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CopaQ8CIE6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CopaQ8CIE6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.45□□□□□ -0.1
CopaQ8CIE6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Gm8410-201ENSMUST00000117225 605 ntBASIC14.45□□□□□ -0.1
CopaQ8CIE6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.45□□□□□ -0.1
CopaQ8CIE6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.45□□□□□ -0.1
CopaQ8CIE6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CopaQ8CIE6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.44□□□□□ -0.1
CopaQ8CIE6 Gm6888-201ENSMUST00000221983 706 ntBASIC14.44□□□□□ -0.1
CopaQ8CIE6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms