Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip4Q8CI96 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip4Q8CI96 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clip4Q8CI96 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip4Q8CI96 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip4Q8CI96 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip4Q8CI96 Gm25287-201ENSMUST00000103846 110 ntBASIC14.27□□□□□ -0.13
Clip4Q8CI96 Gm22918-201ENSMUST00000103855 110 ntBASIC14.27□□□□□ -0.13
Clip4Q8CI96 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.27□□□□□ -0.13
Clip4Q8CI96 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip4Q8CI96 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm22065-201ENSMUST00000103753 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm22066-201ENSMUST00000103761 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm24932-201ENSMUST00000103763 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm24115-201ENSMUST00000103799 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm22190-201ENSMUST00000103827 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm22191-201ENSMUST00000103831 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm24721-201ENSMUST00000103849 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm28018-201ENSMUST00000103869 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm26399-201ENSMUST00000103937 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm25349-201ENSMUST00000177728 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm23616-201ENSMUST00000177797 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm25871-201ENSMUST00000177816 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm24752-201ENSMUST00000178240 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm24496-201ENSMUST00000178287 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm25649-201ENSMUST00000178476 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm25548-201ENSMUST00000178681 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm23147-201ENSMUST00000178841 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm26095-201ENSMUST00000179270 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm22171-201ENSMUST00000179283 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm23936-201ENSMUST00000179354 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm22619-201ENSMUST00000179516 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm25255-201ENSMUST00000179579 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm24755-201ENSMUST00000179691 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm26506-201ENSMUST00000179692 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm25086-201ENSMUST00000179931 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm23243-201ENSMUST00000180047 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm24659-201ENSMUST00000180212 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm24169-201ENSMUST00000180244 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm23689-201ENSMUST00000180354 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm27359-201ENSMUST00000184153 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm27785-201ENSMUST00000184268 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm27466-201ENSMUST00000184396 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm27703-201ENSMUST00000184836 110 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm38225-201ENSMUST00000194001 393 ntBASIC14.26□□□□□ -0.13
Clip4Q8CI96 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clip4Q8CI96 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Clip4Q8CI96 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clip4Q8CI96 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms