Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Zc3h3Q8CHP0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Zc3h3Q8CHP0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Zc3h3Q8CHP0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Zc3h3Q8CHP0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Zc3h3Q8CHP0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Zc3h3Q8CHP0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Gm14263-201ENSMUST00000117955 746 ntBASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Prob1-201ENSMUST00000097619 3021 ntBASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Zc3h3Q8CHP0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Gm26927-201ENSMUST00000182385 965 ntBASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 AU022133-201ENSMUST00000200601 873 ntBASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3h3Q8CHP0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Gm13297-201ENSMUST00000120205 934 ntBASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 B9d1os-201ENSMUST00000137010 674 ntBASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Gm24514-201ENSMUST00000174961 285 ntBASIC13.68□□□□□ -0.22
Zc3h3Q8CHP0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms