Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Gm14042-201ENSMUST00000120139 833 ntBASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbm28Q8CGC6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Gm6916-202ENSMUST00000205523 195 ntBASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rbm28Q8CGC6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Gm12134-201ENSMUST00000122109 520 ntBASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbm28Q8CGC6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rbm28Q8CGC6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms