Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Mir8117-201ENSMUST00000184773 107 ntBASIC17.47■□□□□ 0.39
Smc5Q8CG46 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.47■□□□□ 0.39
Smc5Q8CG46 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Smc5Q8CG46 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.47■□□□□ 0.39
Smc5Q8CG46 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.47■□□□□ 0.39
Smc5Q8CG46 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Gm45003-201ENSMUST00000205875 2158 ntBASIC17.47■□□□□ 0.39
Smc5Q8CG46 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smc5Q8CG46 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.46■□□□□ 0.39
Smc5Q8CG46 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smc5Q8CG46 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.46■□□□□ 0.38
Smc5Q8CG46 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Smc5Q8CG46 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smc5Q8CG46 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smc5Q8CG46 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smc5Q8CG46 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.45■□□□□ 0.38
Smc5Q8CG46 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Gm45612-201ENSMUST00000211320 160 ntBASIC17.45■□□□□ 0.38
Smc5Q8CG46 Gm5364-201ENSMUST00000216789 889 ntBASIC17.45■□□□□ 0.38
Smc5Q8CG46 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.45■□□□□ 0.38
Smc5Q8CG46 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smc5Q8CG46 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Gm43364-201ENSMUST00000196046 3274 ntBASIC17.44■□□□□ 0.38
Smc5Q8CG46 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Gm11025-201ENSMUST00000140773 466 ntBASIC17.44■□□□□ 0.38
Smc5Q8CG46 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc5Q8CG46 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms