Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fam228aQ8CDW1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Gm21362-201ENSMUST00000194272 928 ntBASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Thap2-203ENSMUST00000218989 527 ntBASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Fam228aQ8CDW1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Fam228aQ8CDW1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fam228aQ8CDW1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fam228aQ8CDW1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fam228aQ8CDW1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fam228aQ8CDW1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Fam228aQ8CDW1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Fam228aQ8CDW1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
Fam228aQ8CDW1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Fam228aQ8CDW1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Gm27301-201ENSMUST00000184012 127 ntBASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Fam228aQ8CDW1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms