Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shisa4Q8CA71 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Gm14928-201ENSMUST00000120198 477 ntBASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Gm2445-201ENSMUST00000182798 989 ntBASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Gm29741-201ENSMUST00000192667 421 ntBASIC16.34■□□□□ 0.21
Shisa4Q8CA71 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shisa4Q8CA71 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Shisa4Q8CA71 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shisa4Q8CA71 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shisa4Q8CA71 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Gm4804-201ENSMUST00000182234 999 ntBASIC16.32■□□□□ 0.2
Shisa4Q8CA71 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa4Q8CA71 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Shisa4Q8CA71 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms