Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Gm11803-201ENSMUST00000119966 444 ntBASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtp1Q8C8C1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Gm18753-201ENSMUST00000201000 566 ntBASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtp1Q8C8C1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtp1Q8C8C1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtp1Q8C8C1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16■□□□□ 0.15
Rtp1Q8C8C1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rtp1Q8C8C1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16■□□□□ 0.15
Rtp1Q8C8C1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Rtp1Q8C8C1 Ankra2-208ENSMUST00000226100 1476 ntBASIC16■□□□□ 0.15
Rtp1Q8C8C1 Gm13342-201ENSMUST00000121055 207 ntBASIC16■□□□□ 0.15
Rtp1Q8C8C1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rtp1Q8C8C1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16■□□□□ 0.15
Rtp1Q8C8C1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rtp1Q8C8C1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16■□□□□ 0.15
Rtp1Q8C8C1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rtp1Q8C8C1 Gm9124-201ENSMUST00000191789 1092 ntBASIC16■□□□□ 0.15
Rtp1Q8C8C1 Gm9113-201ENSMUST00000192510 1018 ntBASIC16■□□□□ 0.15
Rtp1Q8C8C1 Gm5069-202ENSMUST00000192714 1011 ntBASIC16■□□□□ 0.15
Rtp1Q8C8C1 Gm9131-201ENSMUST00000193557 1089 ntBASIC16■□□□□ 0.15
Rtp1Q8C8C1 Gm9121-201ENSMUST00000193749 1071 ntBASIC16■□□□□ 0.15
Rtp1Q8C8C1 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rtp1Q8C8C1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms