Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.46■□□□□ 0.23
Alx1Q8C8B0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Gm7488-201ENSMUST00000117148 684 ntBASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Gm24420-201ENSMUST00000176676 59 ntBASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Gm6218-201ENSMUST00000219812 628 ntBASIC16.45■□□□□ 0.22
Alx1Q8C8B0 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Alx1Q8C8B0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx1Q8C8B0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Gm18905-201ENSMUST00000205454 928 ntBASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.43■□□□□ 0.22
Alx1Q8C8B0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms