Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Gm18827-201ENSMUST00000188341 790 ntBASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Gm43118-201ENSMUST00000199149 775 ntBASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a6Q8C6K9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Gm15429-201ENSMUST00000151268 798 ntBASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a6Q8C6K9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Gm13689-201ENSMUST00000119360 685 ntBASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Gm4804-201ENSMUST00000182234 999 ntBASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Gm27839-201ENSMUST00000184242 106 ntBASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Gm5370-201ENSMUST00000187187 574 ntBASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Gm6091-201ENSMUST00000098307 165 ntBASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a6Q8C6K9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Efs-202ENSMUST00000227037 2540 ntBASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Gm15957-201ENSMUST00000118893 974 ntBASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Gm43179-201ENSMUST00000198797 275 ntBASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a6Q8C6K9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Gm26464-201ENSMUST00000157094 305 ntBASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.69□□□□□ -0.38
Col6a6Q8C6K9 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms