Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trim47Q8C0E3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim47Q8C0E3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim47Q8C0E3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim47Q8C0E3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim47Q8C0E3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim47Q8C0E3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim47Q8C0E3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim47Q8C0E3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trim47Q8C0E3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim47Q8C0E3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Gm37714-201ENSMUST00000194742 342 ntBASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Gm42612-201ENSMUST00000197986 623 ntBASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Gm43170-201ENSMUST00000199827 612 ntBASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim47Q8C0E3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.64■□□□□ 0.1
Trim47Q8C0E3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Gm22189-201ENSMUST00000103822 86 ntBASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Gm7488-201ENSMUST00000117148 684 ntBASIC15.64■□□□□ 0.09
Trim47Q8C0E3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim47Q8C0E3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Gm10766-202ENSMUST00000194123 606 ntBASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 AC073947.1-201ENSMUST00000216991 649 ntBASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Gm18027-201ENSMUST00000218947 619 ntBASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim47Q8C0E3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim47Q8C0E3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms