Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf2Q8BZT2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh3rf2Q8BZT2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Gm11918-201ENSMUST00000121660 179 ntBASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh3rf2Q8BZT2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Gm12341-201ENSMUST00000119724 503 ntBASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf2Q8BZT2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf2Q8BZT2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms