Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Gm6888-201ENSMUST00000221983 706 ntBASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc30Q8BVF4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Gm37714-201ENSMUST00000194742 342 ntBASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Gm46209-201ENSMUST00000217912 553 ntBASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Gm18027-201ENSMUST00000218947 619 ntBASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc30Q8BVF4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc30Q8BVF4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.5
Ccdc30Q8BVF4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ccdc30Q8BVF4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Gm44291-201ENSMUST00000203102 2865 ntBASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Gm27680-201ENSMUST00000184192 160 ntBASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Gm43703-201ENSMUST00000200523 763 ntBASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc30Q8BVF4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms