Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Gm9002-201ENSMUST00000178437 499 ntBASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Gm6266-201ENSMUST00000203844 806 ntBASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.96□□□□□ -0.01
Rd3Q8BRE0 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Rd3Q8BRE0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rd3Q8BRE0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Rd3Q8BRE0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rd3Q8BRE0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Gm15678-201ENSMUST00000117573 960 ntBASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Gm27701-201ENSMUST00000184498 110 ntBASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Gm18062-201ENSMUST00000208020 547 ntBASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Gm18055-201ENSMUST00000208254 547 ntBASIC14.95□□□□□ -0.02
Rd3Q8BRE0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rd3Q8BRE0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Gm18307-201ENSMUST00000206864 949 ntBASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Rd3Q8BRE0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms