Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm18489-201ENSMUST00000172565 551 ntBASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.63□□□□□ -0.55
Smco3Q8BQM7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.62□□□□□ -0.55
Smco3Q8BQM7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms