Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc40Q8BI79 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc40Q8BI79 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc40Q8BI79 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc40Q8BI79 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc40Q8BI79 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Ccdc40Q8BI79 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc40Q8BI79 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc40Q8BI79 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc40Q8BI79 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc40Q8BI79 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc40Q8BI79 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc40Q8BI79 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc40Q8BI79 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc40Q8BI79 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ccdc40Q8BI79 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc40Q8BI79 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc40Q8BI79 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms