Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Samm50Q8BGH2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Samm50Q8BGH2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Samm50Q8BGH2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Samm50Q8BGH2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Samm50Q8BGH2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Samm50Q8BGH2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.58■□□□□ 0.24
Samm50Q8BGH2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Samm50Q8BGH2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Gm24158-201ENSMUST00000175263 71 ntBASIC16.57■□□□□ 0.24
Samm50Q8BGH2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Gm27920-201ENSMUST00000183953 96 ntBASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.57■□□□□ 0.24
Samm50Q8BGH2 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.57■□□□□ 0.24
Samm50Q8BGH2 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.57■□□□□ 0.24
Samm50Q8BGH2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Samm50Q8BGH2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Gm38225-201ENSMUST00000194001 393 ntBASIC16.56■□□□□ 0.24
Samm50Q8BGH2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Samm50Q8BGH2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms