Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.04■□□□□ -0
Trim6Q8BGE7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.04■□□□□ -0
Trim6Q8BGE7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.04■□□□□ -0
Trim6Q8BGE7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.04■□□□□ -0
Trim6Q8BGE7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim6Q8BGE7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.03■□□□□ -0
Trim6Q8BGE7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim6Q8BGE7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
Trim6Q8BGE7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.03■□□□□ -0
Trim6Q8BGE7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.03■□□□□ -0
Trim6Q8BGE7 Gm16026-204ENSMUST00000162652 683 ntBASIC15.03■□□□□ -0
Trim6Q8BGE7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.03■□□□□ -0
Trim6Q8BGE7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.03■□□□□ -0
Trim6Q8BGE7 Gm15590-201ENSMUST00000078419 552 ntBASIC15.03■□□□□ -0
Trim6Q8BGE7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Trim6Q8BGE7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.03■□□□□ -0
Trim6Q8BGE7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim6Q8BGE7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trim6Q8BGE7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trim6Q8BGE7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.02■□□□□ -0
Trim6Q8BGE7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.02■□□□□ -0
Trim6Q8BGE7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.02■□□□□ -0
Trim6Q8BGE7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.02■□□□□ -0
Trim6Q8BGE7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trim6Q8BGE7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trim6Q8BGE7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim6Q8BGE7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim6Q8BGE7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim6Q8BGE7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
Trim6Q8BGE7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim6Q8BGE7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim6Q8BGE7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim6Q8BGE7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim6Q8BGE7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim6Q8BGE7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim6Q8BGE7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim6Q8BGE7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim6Q8BGE7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Gm18041-201ENSMUST00000218210 618 ntBASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim6Q8BGE7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms