Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm11793-201ENSMUST00000120433 981 ntBASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Gm43133-201ENSMUST00000197472 463 ntBASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trnp1Q80ZI1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Gm15808-201ENSMUST00000119046 604 ntBASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Gm26927-201ENSMUST00000182385 965 ntBASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Gm38341-201ENSMUST00000195357 515 ntBASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Gm18935-201ENSMUST00000212692 664 ntBASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trnp1Q80ZI1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Gm26083-201ENSMUST00000157904 193 ntBASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Cts7-204ENSMUST00000225321 1257 ntBASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trnp1Q80ZI1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Gm29741-201ENSMUST00000192667 421 ntBASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Gm9368-201ENSMUST00000219348 831 ntBASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Gm10268-201ENSMUST00000085340 555 ntBASIC15.77■□□□□ 0.12
Trnp1Q80ZI1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trnp1Q80ZI1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trnp1Q80ZI1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.77■□□□□ 0.11
Trnp1Q80ZI1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trnp1Q80ZI1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trnp1Q80ZI1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trnp1Q80ZI1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trnp1Q80ZI1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trnp1Q80ZI1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trnp1Q80ZI1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trnp1Q80ZI1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.77■□□□□ 0.11
Trnp1Q80ZI1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trnp1Q80ZI1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms