Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.12□□□□□ -0.15
Rpp38Q80UU2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.12□□□□□ -0.15
Rpp38Q80UU2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.11□□□□□ -0.15
Rpp38Q80UU2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Gm13453-201ENSMUST00000118708 357 ntBASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Gm44344-201ENSMUST00000200287 129 ntBASIC14.11□□□□□ -0.15
Rpp38Q80UU2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rpp38Q80UU2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Gm13223-201ENSMUST00000118609 747 ntBASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpp38Q80UU2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpp38Q80UU2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms