Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Gm8602-201ENSMUST00000184045 607 ntBASIC13.08□□□□□ -0.32
Pif1Q80SX8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.08□□□□□ -0.32
Pif1Q80SX8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.08□□□□□ -0.32
Pif1Q80SX8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.08□□□□□ -0.32
Pif1Q80SX8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.08□□□□□ -0.32
Pif1Q80SX8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pif1Q80SX8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.07□□□□□ -0.32
Pif1Q80SX8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.07□□□□□ -0.32
Pif1Q80SX8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Gm15460-201ENSMUST00000118147 391 ntBASIC13.07□□□□□ -0.32
Pif1Q80SX8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Gm19220-201ENSMUST00000222682 803 ntBASIC13.07□□□□□ -0.32
Pif1Q80SX8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Pif1Q80SX8 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.07□□□□□ -0.32
Pif1Q80SX8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pif1Q80SX8 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.06□□□□□ -0.32
Pif1Q80SX8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Pif1Q80SX8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.06□□□□□ -0.32
Pif1Q80SX8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.06□□□□□ -0.32
Pif1Q80SX8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.06□□□□□ -0.32
Pif1Q80SX8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.06□□□□□ -0.32
Pif1Q80SX8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pif1Q80SX8 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms