Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd1Q6PIP5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Gm15460-201ENSMUST00000118147 391 ntBASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Gm15393-201ENSMUST00000120499 219 ntBASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Gm12134-201ENSMUST00000122109 520 ntBASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Gm9522-201ENSMUST00000182394 926 ntBASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd1Q6PIP5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Gm12859-201ENSMUST00000117834 427 ntBASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Gm44608-201ENSMUST00000206827 855 ntBASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Gm6218-201ENSMUST00000219812 628 ntBASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd1Q6PIP5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd1Q6PIP5 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms