Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm27772-201ENSMUST00000184900 187 ntBASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Gm13612-201ENSMUST00000119276 390 ntBASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Gm12485-201ENSMUST00000119641 291 ntBASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Gm24644-201ENSMUST00000157114 139 ntBASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Gm24196-201ENSMUST00000179161 110 ntBASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Gm5370-201ENSMUST00000187187 574 ntBASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snrnp40Q6PE01 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Gm5187-201ENSMUST00000117317 991 ntBASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Gm43818-201ENSMUST00000200605 466 ntBASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Gm7399-201ENSMUST00000032395 858 ntBASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snrnp40Q6PE01 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms